BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002A03SP1|AL424882
(788 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1497 1406 0.0
>3x_Contig1497
Length = 11582
Score = 1406 bits (693), Expect = 0.0
Identities = 752/785 (95%), Gaps = 3/785 (0%)
Strand = Plus / Plus
Query: 3 tcattcggattcgtgagatgcgagcgaggcttgcacggrcaaaagtactgttctgatttg 62
||||||||||||| ||||||| ||| |||||||||||| |||||||||||||||||||||
Sbjct: 8580 tcattcggattcg-gagatgcaagcaaggcttgcacggacaaaagtactgttctgatttg 8638
Query: 63 gagggcaggtgaccaattatttttcaaaacatcgagacatattcttwcctaaccgatcga 122
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 8639 aagggcaggtgaccaattatttttcaaaacatcgagacatattct-acctaaccgatcga 8697
Query: 123 tattgggatggtatatttttgtcaaaraccttacctttggtgcttccattggataatcat 182
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 8698 tattgggatggtatatttttgtcaaaaaccttacctttggtgcttccattggataatcat 8757
Query: 183 ccggtaggaacaattctagttggragaccccattttcatagggactttgctgcggaccct 242
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 8758 ccggtaggaacaattctagttggaagaccccattttcatagggactttgctgcggaccct 8817
Query: 243 ctatcgtcacttggraatracgtaaatkatcctcatgtggttctgcagtgattccgggga 302
|||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 8818 ctatcgtcacttggaaataacgtaaattatcctcatgtggttctgcagtgattccgggga 8877
Query: 303 ccgr-tcgctcactaacctttcagtttcctgtgtaaatgatatttttttttttcttggtt 361
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8878 ccggatcgctcactaacctttcagtttcctgtgtaaatgatatttttttttttcttggtt 8937
Query: 362 agttataacgctattaattratactcagatagaraagrrcgtgtaagtktccaaarrttt 421
||||||||||||||||||| ||||||||||||| ||| ||||||||| |||||| |||
Sbjct: 8938 agttataacgctattaattaatactcagatagaaaagaacgtgtaagtttccaaaaattt 8997
Query: 422 tcaacatactttgataattctcttgggtaatgctgccattgtactttgarctgggtgatc 481
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 8998 tcaacatactttgataattctcttgggtaatgctgccattgtactttgaactgggtgatc 9057
Query: 482 ggtactcgatccgccgtagaaratcaggaatagrtcctgattttgarragggttaaagct 541
||||||||||||||||||||| ||||||||||| |||||||||| | ||||||||||||
Sbjct: 9058 ggtactcgatccgccgtagaaaatcaggaatagatcctgattttaaaaagggttaaagct 9117
Query: 542 tttagtgccttarrtgccttcaagacctttaatatgaaactattcgatatcgaaaaagac 601
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9118 tttagtgccttaaatgccttcaagacctttaatatgaaactattcgatatcgaaaaagac 9177
Query: 602 aatgcgaagtcacgtgatacttcatcatcatcatcatcatcatcacaggacagtataccg 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9178 aatgcgaagtcacgtgatacttcatcatcatcatcatcatcatcacaggacagtataccg 9237
Query: 662 tccatgttgatgactgtcagasaaasgtatataaasamtgataaaaaaaccttttgaaaa 721
||||||||||||||||||||| ||| ||||||||| | ||||||||||||||||||||||
Sbjct: 9238 tccatgttgatgactgtcagagaaaggtatataaagactgataaaaaaaccttttgaaaa 9297
Query: 722 tgcgaaaaacctcttcattaaaaagactactaatgtcctcccattagagctttagtatta 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9298 tgcgaaaaacctcttcattaaaaagactactaatgtcctcccattagagctttagtatta 9357
Query: 782 tataa 786
|||||
Sbjct: 9358 tataa 9362
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,629
Number of Sequences: 1807
Number of extensions: 11629
Number of successful extensions: 756
Number of sequences better than 1.0e-20: 1
length of query: 788
length of database: 10,358,551
effective HSP length: 16
effective length of query: 772
effective length of database: 10,329,639
effective search space: 7974481308
effective search space used: 7974481308
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)